Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm37770-201ENSMUST00000192855 772 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm43243-201ENSMUST00000199964 278 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm19764-201ENSMUST00000203630 649 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm45525-201ENSMUST00000210800 389 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Olfr687-201ENSMUST00000098154 938 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim9Q8C7M3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm13400-201ENSMUST00000117436 380 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm12583-201ENSMUST00000120677 853 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm25244-201ENSMUST00000178089 132 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm28011-201ENSMUST00000184097 175 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm27601-201ENSMUST00000184794 127 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm8581-201ENSMUST00000188636 890 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm18985-201ENSMUST00000196472 1079 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm2996-201ENSMUST00000211398 537 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm10205-201ENSMUST00000087431 234 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim9Q8C7M3 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm25877-201ENSMUST00000104326 129 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm8855-201ENSMUST00000118888 878 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm8312-201ENSMUST00000119380 618 ntBASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim9Q8C7M3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms