Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm29411-201ENSMUST00000189889 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21717-201ENSMUST00000189902 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21765-201ENSMUST00000189913 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21841-201ENSMUST00000189958 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21895-201ENSMUST00000189997 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29180-201ENSMUST00000190003 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28607-201ENSMUST00000190142 339 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28939-201ENSMUST00000190351 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21902-201ENSMUST00000190361 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28223-201ENSMUST00000190469 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29029-201ENSMUST00000190520 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29575-201ENSMUST00000190597 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21898-201ENSMUST00000190727 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29300-201ENSMUST00000190738 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29092-201ENSMUST00000190768 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20793-201ENSMUST00000190779 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28879-201ENSMUST00000190973 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21752-201ENSMUST00000191023 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21757-201ENSMUST00000191075 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28841-201ENSMUST00000191284 695 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21878-201ENSMUST00000191365 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28121-201ENSMUST00000191420 339 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29469-201ENSMUST00000191448 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21855-201ENSMUST00000191596 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm36398-201ENSMUST00000192255 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21907-201ENSMUST00000192989 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20928-201ENSMUST00000192992 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm37476-201ENSMUST00000193046 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20770-201ENSMUST00000193474 694 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21678-201ENSMUST00000193567 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21768-201ENSMUST00000194103 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm30312-201ENSMUST00000194516 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20836-201ENSMUST00000194582 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21660-201ENSMUST00000195789 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm19131-201ENSMUST00000203408 789 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm44157-201ENSMUST00000204720 410 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm7198-201ENSMUST00000219635 1074 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm32023-201ENSMUST00000220168 661 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm46391-201ENSMUST00000220704 203 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 AC154481.1-201ENSMUST00000223532 331 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 AC161758.1-201ENSMUST00000226123 310 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 AC116319.2-201ENSMUST00000228159 984 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Sprr1a-201ENSMUST00000054599 806 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Tigit-201ENSMUST00000096065 963 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Rap1gds1-205ENSMUST00000196280 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Olfr214-205ENSMUST00000217313 2802 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Usp28-201ENSMUST00000047349 4133 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Pex12-201ENSMUST00000018877 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 AC123619.1-203ENSMUST00000225276 2757 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Adgrl3-209ENSMUST00000119385 4905 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 AC100729.1-201ENSMUST00000225458 1454 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Lgals8-206ENSMUST00000135166 2416 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Trim35Q8C006 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Trim35Q8C006 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trim35Q8C006 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trim35Q8C006 AC125223.2-202ENSMUST00000225020 4103 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Atg12-201ENSMUST00000035648 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gpr61-201ENSMUST00000062028 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gngt2-206ENSMUST00000107712 498 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim35Q8C006 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm5601-201ENSMUST00000118909 972 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm27762-201ENSMUST00000183417 109 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Ighv1-8-201ENSMUST00000192236 293 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm44074-201ENSMUST00000204562 337 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm44817-201ENSMUST00000205416 453 ntBASIC9.27□□□□□ -0.93
Trim35Q8C006 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC9.27□□□□□ -0.93
Trim35Q8C006 AL589742.1-201ENSMUST00000226034 349 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms