Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 AC132587.1-201ENSMUST00000220562 166 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 AC150560.3-201ENSMUST00000227442 455 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm26107-201ENSMUST00000083972 107 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 AC166574.1-201ENSMUST00000226916 1309 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm37289-201ENSMUST00000195409 1402 ntBASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim41Q5NCC3 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm7834-201ENSMUST00000117560 437 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm11903-201ENSMUST00000118958 727 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm23867-201ENSMUST00000122649 274 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm19057-201ENSMUST00000194329 1197 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm29809-201ENSMUST00000218423 493 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm9628-201ENSMUST00000222169 725 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 CT030662.2-201ENSMUST00000226942 805 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Gm38339-201ENSMUST00000195479 1829 ntBASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim41Q5NCC3 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm2762-207ENSMUST00000202739 2665 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm11443-201ENSMUST00000118790 479 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm13130-201ENSMUST00000119195 1166 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm12593-201ENSMUST00000120981 743 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm25780-201ENSMUST00000122528 253 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm24385-201ENSMUST00000122694 350 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm8930-201ENSMUST00000201693 768 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm34149-201ENSMUST00000203547 304 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm38840-201ENSMUST00000204716 843 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm5831-201ENSMUST00000216016 1209 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 AC154250.1-201ENSMUST00000224775 489 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 AC133283.1-201ENSMUST00000228443 859 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 CT009550.2-201ENSMUST00000228851 399 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm22504-201ENSMUST00000082963 139 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Gm5446-201ENSMUST00000091762 784 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Mir465-201ENSMUST00000093563 74 ntBASIC13□□□□□ -0.33
Trim41Q5NCC3 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim41Q5NCC3 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim41Q5NCC3 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm42996-201ENSMUST00000196116 1636 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm16221-201ENSMUST00000117331 393 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm14712-201ENSMUST00000120195 772 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Mir1953-201ENSMUST00000157866 89 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm26024-201ENSMUST00000158657 322 ntBASIC12.99□□□□□ -0.33
Trim41Q5NCC3 Gm22529-201ENSMUST00000158817 123 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms