Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm13462-201ENSMUST00000121472 961 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm25556-201ENSMUST00000158077 144 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm22523-201ENSMUST00000158696 100 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm24176-201ENSMUST00000158928 121 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm3025-201ENSMUST00000163454 489 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm3077-201ENSMUST00000165903 627 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm2878-201ENSMUST00000170173 486 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm20549-201ENSMUST00000174804 429 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm22569-201ENSMUST00000175545 124 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm27156-201ENSMUST00000184589 754 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm27427-201ENSMUST00000185134 193 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm43160-201ENSMUST00000196453 421 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm36448-201ENSMUST00000199916 438 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm45279-201ENSMUST00000210315 391 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AL837512.1-201ENSMUST00000223914 1073 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm24621-201ENSMUST00000082679 140 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.03□□□□□ -1.28
Syne3Q4FZC9 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.03□□□□□ -1.28
Syne3Q4FZC9 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.02□□□□□ -1.28
Syne3Q4FZC9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC7.02□□□□□ -1.28
Syne3Q4FZC9 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm23748-201ENSMUST00000104227 131 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm2178-201ENSMUST00000104927 357 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm12468-201ENSMUST00000116189 404 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm14836-201ENSMUST00000118567 471 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm12001-201ENSMUST00000121727 913 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm15274-201ENSMUST00000131442 291 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm21979-201ENSMUST00000139887 291 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm15259-201ENSMUST00000151262 291 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm25281-201ENSMUST00000157270 104 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm23082-201ENSMUST00000157852 133 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm25989-201ENSMUST00000158761 133 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm6726-201ENSMUST00000172786 681 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm22990-201ENSMUST00000175427 89 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm18799-201ENSMUST00000189104 913 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm29141-201ENSMUST00000190357 882 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm29072-201ENSMUST00000191149 678 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm35323-201ENSMUST00000191836 499 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm18547-201ENSMUST00000192439 811 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm19764-201ENSMUST00000203630 649 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm44411-201ENSMUST00000204172 349 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm10688-201ENSMUST00000214985 520 ntBASIC7.02□□□□□ -1.29
Syne3Q4FZC9 Gm18040-201ENSMUST00000217922 827 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms