Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm31711-201ENSMUST00000220687 196 ntBASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Gm24036-201ENSMUST00000082868 156 ntBASIC6.78□□□□□ -1.32
Trim43aQ3TL54 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.78□□□□□ -1.32
Trim43aQ3TL54 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim43aQ3TL54 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.77□□□□□ -1.32
Trim43aQ3TL54 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Trim43aQ3TL54 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Trim43aQ3TL54 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm13877-201ENSMUST00000120614 417 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm23259-201ENSMUST00000158318 303 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm8609-201ENSMUST00000182967 998 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm27360-201ENSMUST00000183487 80 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm19480-201ENSMUST00000185547 667 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm7867-201ENSMUST00000189856 546 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm18849-201ENSMUST00000189861 560 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm37620-201ENSMUST00000192910 501 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm2754-201ENSMUST00000223383 589 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim43aQ3TL54 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm22231-201ENSMUST00000101027 73 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm14356-201ENSMUST00000118322 869 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm14353-201ENSMUST00000122200 869 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm23888-201ENSMUST00000122690 253 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm26595-201ENSMUST00000181585 484 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm28620-201ENSMUST00000190463 439 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Trim43aQ3TL54 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.76□□□□□ -1.33
Trim43aQ3TL54 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms