Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm37430-201ENSMUST00000193039 196 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 Gm7554-201ENSMUST00000202282 574 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 Gm18467-201ENSMUST00000208805 434 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.15□□□□□ -1.26
Sox9Q04887 Gm20946-201ENSMUST00000212367 461 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 AC126554.4-201ENSMUST00000221055 409 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.15□□□□□ -1.26
Sox9Q04887 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sox9Q04887 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sox9Q04887 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Sox9Q04887 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Sox9Q04887 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Sox9Q04887 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Sox9Q04887 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.15□□□□□ -1.27
Sox9Q04887 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.15□□□□□ -1.27
Sox9Q04887 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Sox9Q04887 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Sox9Q04887 Gm42549-201ENSMUST00000202392 7004 ntBASIC7.15□□□□□ -1.27
Sox9Q04887 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Sox9Q04887 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Sox9Q04887 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Sox9Q04887 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Sox9Q04887 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Sox9Q04887 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.27
Sox9Q04887 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Sox9Q04887 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Sox9Q04887 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Sox9Q04887 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.15□□□□□ -1.27
Sox9Q04887 Gm38244-201ENSMUST00000191737 2586 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm8812-201ENSMUST00000118496 412 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm13224-201ENSMUST00000119586 94 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm12288-201ENSMUST00000121054 1282 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm13237-201ENSMUST00000122151 635 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm8648-201ENSMUST00000122457 221 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC7.14□□□□□ -1.27
Sox9Q04887 Snora47-201ENSMUST00000157483 138 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.14□□□□□ -1.27
Sox9Q04887 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm42814-201ENSMUST00000199370 460 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm43136-201ENSMUST00000200403 636 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Gm18600-201ENSMUST00000207205 505 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Sox9Q04887 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm9118-201ENSMUST00000219246 754 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Mir350-201ENSMUST00000083639 99 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm10205-201ENSMUST00000087431 234 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Sox9Q04887 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.14□□□□□ -1.27
Sox9Q04887 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Sox9Q04887 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Sox9Q04887 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.13□□□□□ -1.27
Sox9Q04887 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox9Q04887 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Sox9Q04887 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox9Q04887 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox9Q04887 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox9Q04887 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox9Q04887 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox9Q04887 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.13□□□□□ -1.27
Sox9Q04887 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Sox9Q04887 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Sox9Q04887 Grik1-210ENSMUST00000228034 2708 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms