Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.87□□□□□ -1.47
Scn1bP97952 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scn1bP97952 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.87□□□□□ -1.47
Scn1bP97952 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.87□□□□□ -1.47
Scn1bP97952 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Scn1bP97952 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Scn1bP97952 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Scn1bP97952 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scn1bP97952 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Scn1bP97952 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm10307-201ENSMUST00000189839 1337 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm24473-201ENSMUST00000104483 131 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm7129-201ENSMUST00000117402 997 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm13983-201ENSMUST00000118018 865 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm16420-201ENSMUST00000120258 856 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm23954-201ENSMUST00000157213 353 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm24286-201ENSMUST00000157632 128 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm23222-201ENSMUST00000158117 76 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm26381-201ENSMUST00000174895 92 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Mir7084-201ENSMUST00000183876 70 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm3121-201ENSMUST00000187086 406 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm44431-201ENSMUST00000203500 413 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm19039-201ENSMUST00000204363 575 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm44590-201ENSMUST00000206161 391 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm44603-201ENSMUST00000206820 367 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC5.86□□□□□ -1.47
Scn1bP97952 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm18503-201ENSMUST00000220340 728 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm46424-201ENSMUST00000221567 168 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm10126-201ENSMUST00000221732 168 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 AC154562.1-201ENSMUST00000226140 966 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 n-R5s29-201ENSMUST00000082836 119 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Scn1bP97952 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Scn1bP97952 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.86□□□□□ -1.47
Scn1bP97952 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Scn1bP97952 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.85□□□□□ -1.47
Scn1bP97952 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1bP97952 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1bP97952 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1bP97952 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.85□□□□□ -1.47
Scn1bP97952 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scn1bP97952 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC5.85□□□□□ -1.47
Scn1bP97952 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scn1bP97952 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scn1bP97952 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Scn1bP97952 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1bP97952 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scn1bP97952 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scn1bP97952 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scn1bP97952 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms