Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm42772-201ENSMUST00000199945 3041 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Mir708-201ENSMUST00000102189 109 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm26289-201ENSMUST00000104169 131 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm15616-201ENSMUST00000118662 375 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm13222-201ENSMUST00000119638 138 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm12618-201ENSMUST00000121754 483 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm37430-201ENSMUST00000193039 196 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm37463-201ENSMUST00000193819 796 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm30694-201ENSMUST00000209278 1230 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm17997-201ENSMUST00000211801 840 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm45734-201ENSMUST00000211916 411 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 CT009515.3-201ENSMUST00000226509 671 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.61□□□□□ -1.51
Nkx3-1P97436 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx3-1P97436 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm8878-201ENSMUST00000173552 1725 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm14712-201ENSMUST00000120195 772 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm25487-201ENSMUST00000158725 125 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm27512-201ENSMUST00000175328 126 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm21542-201ENSMUST00000182307 993 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx3-1P97436 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms