Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.74□□□□□ -1.49
Cldn18P56857 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.74□□□□□ -1.49
Cldn18P56857 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.74□□□□□ -1.49
Cldn18P56857 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.74□□□□□ -1.49
Cldn18P56857 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cldn18P56857 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.74□□□□□ -1.49
Cldn18P56857 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Cldn18P56857 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.74□□□□□ -1.49
Cldn18P56857 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Cldn18P56857 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm14755-201ENSMUST00000118037 384 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm8855-201ENSMUST00000118888 878 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm8722-201ENSMUST00000121466 769 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm12929-201ENSMUST00000122406 370 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.73□□□□□ -1.49
Cldn18P56857 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm18808-201ENSMUST00000173316 462 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm5283-201ENSMUST00000177874 334 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm43048-201ENSMUST00000196101 388 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.73□□□□□ -1.49
Cldn18P56857 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm44861-201ENSMUST00000208325 1220 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Gm7413-201ENSMUST00000219498 462 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm18620-201ENSMUST00000222295 324 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.73□□□□□ -1.49
Cldn18P56857 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm10108-201ENSMUST00000078246 319 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.73□□□□□ -1.49
Cldn18P56857 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Cldn18P56857 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cldn18P56857 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.73□□□□□ -1.49
Cldn18P56857 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn18P56857 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cldn18P56857 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm15901-201ENSMUST00000117663 941 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm12713-201ENSMUST00000118404 764 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm12565-201ENSMUST00000119004 649 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm22276-201ENSMUST00000122469 129 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn18P56857 Gm23894-201ENSMUST00000158107 313 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm25374-201ENSMUST00000158158 101 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm25904-201ENSMUST00000158491 143 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC5.72□□□□□ -1.49
Cldn18P56857 Mir5107-201ENSMUST00000175586 88 ntBASIC5.72□□□□□ -1.49
Cldn18P56857 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms