Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.21□□□□□ -1.41
Sox3P53784 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.21□□□□□ -1.41
Sox3P53784 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox3P53784 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Sox3P53784 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.21□□□□□ -1.42
Sox3P53784 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox3P53784 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Sox3P53784 Mir466j-201ENSMUST00000116876 122 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Gm11256-201ENSMUST00000118109 829 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.21□□□□□ -1.42
Sox3P53784 Gm23799-201ENSMUST00000175559 120 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm6061-201ENSMUST00000175860 492 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Mir6986-201ENSMUST00000184483 58 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm29197-201ENSMUST00000185922 702 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm3841-201ENSMUST00000191399 451 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.21□□□□□ -1.42
Sox3P53784 Gm43215-201ENSMUST00000199108 252 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Gm7554-201ENSMUST00000202282 574 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Sox3P53784 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.21□□□□□ -1.42
Sox3P53784 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.21□□□□□ -1.42
Sox3P53784 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.21□□□□□ -1.42
Sox3P53784 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.21□□□□□ -1.42
Sox3P53784 Gm9269-201ENSMUST00000221661 578 ntBASIC6.21□□□□□ -1.42
Sox3P53784 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Gm15500-201ENSMUST00000071523 894 ntBASIC6.21□□□□□ -1.42
Sox3P53784 AW822073-201ENSMUST00000075305 555 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Sox3P53784 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Sox3P53784 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.21□□□□□ -1.42
Sox3P53784 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sox3P53784 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sox3P53784 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Gm23739-201ENSMUST00000102295 108 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Gm13400-201ENSMUST00000117436 380 ntBASIC6.2□□□□□ -1.42
Sox3P53784 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm15502-201ENSMUST00000121449 208 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.2□□□□□ -1.42
Sox3P53784 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm22552-201ENSMUST00000157796 337 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm25244-201ENSMUST00000178089 132 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm26570-201ENSMUST00000180672 342 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm5418-201ENSMUST00000206932 528 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm18467-201ENSMUST00000208805 434 ntBASIC6.2□□□□□ -1.42
Sox3P53784 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.2□□□□□ -1.42
Sox3P53784 AV026068-216ENSMUST00000223874 328 ntBASIC6.2□□□□□ -1.42
Sox3P53784 AV026068-218ENSMUST00000223980 575 ntBASIC6.2□□□□□ -1.42
Sox3P53784 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Sox3P53784 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Sox3P53784 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Sox3P53784 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Thap6-201ENSMUST00000191860 3151 ntBASIC6.2□□□□□ -1.42
Sox3P53784 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.2□□□□□ -1.42
Sox3P53784 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms