Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm9499-201ENSMUST00000180888 964 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC8.52□□□□□ -1.05
Col18a1P39061 Mrgpra14-201ENSMUST00000189782 913 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm43124-201ENSMUST00000201878 278 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm43631-201ENSMUST00000202011 369 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm44432-201ENSMUST00000203342 938 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm44940-201ENSMUST00000206225 1247 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Col18a1P39061 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm18705-201ENSMUST00000215985 913 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 CT025616.1-201ENSMUST00000221158 412 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 AC158388.1-201ENSMUST00000225441 256 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 n-R5s215-201ENSMUST00000082480 104 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Mir27a-201ENSMUST00000083510 87 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Col18a1P39061 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.52□□□□□ -1.05
Col18a1P39061 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm44562-201ENSMUST00000207194 1347 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm10764-202ENSMUST00000220397 2335 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC8.51□□□□□ -1.05
Col18a1P39061 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm25439-201ENSMUST00000158280 131 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm20689-201ENSMUST00000176033 279 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC8.51□□□□□ -1.05
Col18a1P39061 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm44330-201ENSMUST00000200106 143 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 AC116589.9-201ENSMUST00000221462 908 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 AC174797.4-201ENSMUST00000225510 347 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm37686-201ENSMUST00000194099 2309 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Gm44750-201ENSMUST00000206185 2223 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm37238-201ENSMUST00000195552 2390 ntBASIC8.51□□□□□ -1.05
Col18a1P39061 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Col18a1P39061 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Col18a1P39061 Gm14175-201ENSMUST00000119835 241 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm12591-201ENSMUST00000122407 1177 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm24081-201ENSMUST00000175177 125 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm22355-201ENSMUST00000175531 96 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm18969-201ENSMUST00000189423 730 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm9332-201ENSMUST00000198431 730 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm18422-201ENSMUST00000203663 1032 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm7890-201ENSMUST00000204877 601 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm19572-201ENSMUST00000214326 338 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Gm9788-201ENSMUST00000057038 906 ntBASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Col18a1P39061 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col18a1P39061 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col18a1P39061 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms