Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col2a1P28481 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.21□□□□□ -1.26
Col2a1P28481 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col2a1P28481 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col2a1P28481 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm25415-201ENSMUST00000104220 132 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm22194-201ENSMUST00000116869 95 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm15616-201ENSMUST00000118662 375 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm15194-201ENSMUST00000120453 434 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm11848-201ENSMUST00000121207 973 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.2□□□□□ -1.26
Col2a1P28481 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm23995-201ENSMUST00000158060 129 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm22210-201ENSMUST00000158101 144 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm25013-201ENSMUST00000158402 128 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm24081-201ENSMUST00000175177 125 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm25065-201ENSMUST00000177914 132 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm25891-201ENSMUST00000180050 132 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm26923-201ENSMUST00000182615 996 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.2□□□□□ -1.26
Col2a1P28481 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm42886-201ENSMUST00000199214 466 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm7802-201ENSMUST00000216464 262 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.2□□□□□ -1.26
Col2a1P28481 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 AC129537.1-201ENSMUST00000226596 1228 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm7337-202ENSMUST00000181439 2655 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.2□□□□□ -1.26
Col2a1P28481 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col2a1P28481 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Col2a1P28481 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col2a1P28481 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col2a1P28481 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm26455-201ENSMUST00000175300 92 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Gm45724-201ENSMUST00000213031 420 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.19□□□□□ -1.26
Col2a1P28481 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm9237-201ENSMUST00000221499 548 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col2a1P28481 AC154616.2-201ENSMUST00000227978 398 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm6776-201ENSMUST00000057752 900 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Zfp850-201ENSMUST00000099111 941 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col2a1P28481 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.19□□□□□ -1.26
Col2a1P28481 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Col2a1P28481 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms