Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm11360-201ENSMUST00000221898 262 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm7557-201ENSMUST00000221935 865 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 AC130219.2-201ENSMUST00000228765 807 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm24451-201ENSMUST00000083353 133 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.1□□□□□ -1.59
Sdc1P18828 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sdc1P18828 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm22150-201ENSMUST00000104447 135 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm11761-201ENSMUST00000121392 445 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm15079-201ENSMUST00000121943 216 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm14747-201ENSMUST00000149888 984 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm4997-201ENSMUST00000154056 360 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm23071-201ENSMUST00000158242 115 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm23139-201ENSMUST00000179454 132 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm18342-201ENSMUST00000186987 694 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm18350-201ENSMUST00000187395 955 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm2427-201ENSMUST00000189121 881 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm37376-201ENSMUST00000192176 453 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm37729-201ENSMUST00000194761 1172 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm9517-201ENSMUST00000195021 874 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm7419-201ENSMUST00000209962 925 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.09□□□□□ -1.59
Sdc1P18828 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm8275-201ENSMUST00000219732 424 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm17849-201ENSMUST00000219788 853 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 AL844586.1-201ENSMUST00000224297 1042 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Sdc1P18828 Olfr1255-201ENSMUST00000057369 933 ntBASIC5.09□□□□□ -1.59
Sdc1P18828 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sdc1P18828 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sdc1P18828 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Sdc1P18828 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.09□□□□□ -1.6
Sdc1P18828 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Sdc1P18828 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Sdc1P18828 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Sdc1P18828 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Sdc1P18828 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Sdc1P18828 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Sdc1P18828 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.09□□□□□ -1.6
Sdc1P18828 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.09□□□□□ -1.6
Sdc1P18828 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.09□□□□□ -1.6
Sdc1P18828 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Sdc1P18828 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sdc1P18828 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Sdc1P18828 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.08□□□□□ -1.6
Sdc1P18828 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms