Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
Col1a1P11087 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.46□□□□□ -1.22
Col1a1P11087 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Col1a1P11087 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Col1a1P11087 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col1a1P11087 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Col1a1P11087 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Col1a1P11087 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Col1a1P11087 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.45□□□□□ -1.22
Col1a1P11087 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col1a1P11087 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
Col1a1P11087 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm22529-201ENSMUST00000158817 123 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Gm1972-201ENSMUST00000181606 964 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Igkv4-75-201ENSMUST00000197204 359 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Gm29778-201ENSMUST00000201667 466 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 LOC665443-201ENSMUST00000212284 796 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm5830-201ENSMUST00000049117 443 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col1a1P11087 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Col1a1P11087 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.45□□□□□ -1.22
Col1a1P11087 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.45□□□□□ -1.22
Col1a1P11087 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Col1a1P11087 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Col1a1P11087 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Col1a1P11087 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Col1a1P11087 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm14356-201ENSMUST00000118322 869 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm12937-201ENSMUST00000118333 448 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm13245-201ENSMUST00000119646 260 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm11481-201ENSMUST00000120069 255 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Klra13-ps-201ENSMUST00000125813 802 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Mirt2-201ENSMUST00000175179 285 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm18348-201ENSMUST00000191227 820 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm29745-201ENSMUST00000198005 687 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm44213-201ENSMUST00000204977 703 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 AC153357.1-201ENSMUST00000219190 482 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 AC154583.1-201ENSMUST00000224788 655 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Col1a1P11087 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.44□□□□□ -1.22
Col1a1P11087 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.44□□□□□ -1.22
Col1a1P11087 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col1a1P11087 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms