Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm14656-201ENSMUST00000120342 502 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Trio-210ENSMUST00000227337 6375 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Gm44090-201ENSMUST00000204669 1834 ntBASIC6.13□□□□□ -1.43
Col6a3E9PWQ3 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm15096-201ENSMUST00000121918 878 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm24217-201ENSMUST00000158260 133 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 V1rg10-201ENSMUST00000183378 937 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm29576-201ENSMUST00000188020 678 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm28354-201ENSMUST00000190904 678 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm28266-201ENSMUST00000191410 439 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 AC132587.1-201ENSMUST00000220562 166 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm15568-201ENSMUST00000118589 1213 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm5699-201ENSMUST00000152491 723 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm23327-201ENSMUST00000157420 78 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm10319-202ENSMUST00000159439 846 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm37493-201ENSMUST00000193167 433 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm11825-201ENSMUST00000120710 736 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Col6a3E9PWQ3 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms