Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm24216-201ENSMUST00000158259 117 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm5947-201ENSMUST00000179156 714 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm5645-201ENSMUST00000179597 714 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm25019-201ENSMUST00000179732 110 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm27972-201ENSMUST00000184720 137 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm34149-201ENSMUST00000203547 304 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm8534-201ENSMUST00000118553 766 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm13245-201ENSMUST00000119646 260 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm16531-201ENSMUST00000180658 967 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Gm7676-201ENSMUST00000084055 319 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a4A2AX52 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.39□□□□□ -1.55
Col6a4A2AX52 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm8692-201ENSMUST00000118102 438 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm13013-201ENSMUST00000119087 523 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm23662-201ENSMUST00000158046 111 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm22636-201ENSMUST00000158142 275 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm22261-201ENSMUST00000158691 324 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm44902-201ENSMUST00000206177 805 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 CT025642.2-201ENSMUST00000225009 1649 ntBASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a4A2AX52 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms