Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.34□□□□□ -1.39
H2afb2S4R1M3 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.34□□□□□ -1.39
H2afb2S4R1M3 Gm15732-201ENSMUST00000079794 480 ntBASIC6.34□□□□□ -1.39
H2afb2S4R1M3 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
H2afb2S4R1M3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
H2afb2S4R1M3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
H2afb2S4R1M3 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
H2afb2S4R1M3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm15901-201ENSMUST00000117663 941 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm44856-201ENSMUST00000206639 304 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm24695-201ENSMUST00000083877 83 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H2afb2S4R1M3 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm12565-201ENSMUST00000119004 649 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm12115-201ENSMUST00000119969 447 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm12101-201ENSMUST00000121590 390 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm5843-201ENSMUST00000121631 476 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm22604-201ENSMUST00000157604 311 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm24359-201ENSMUST00000158418 221 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm4202-201ENSMUST00000169025 733 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm37477-201ENSMUST00000195215 884 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm43157-201ENSMUST00000198223 412 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Gm44984-201ENSMUST00000207802 394 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AC132446.1-201ENSMUST00000222655 226 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H2afb2S4R1M3 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 199.4 ms