Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm8722-201ENSMUST00000121466 769 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm22311-201ENSMUST00000158006 110 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm18808-201ENSMUST00000173316 462 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm24812-201ENSMUST00000175315 284 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm24300-201ENSMUST00000177809 109 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm24017-201ENSMUST00000178726 109 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm23952-201ENSMUST00000179380 109 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm26557-201ENSMUST00000180756 493 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm37135-201ENSMUST00000192652 534 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Upk3aQ9JKX8 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm26289-201ENSMUST00000104169 131 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm13400-201ENSMUST00000117436 380 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm12369-201ENSMUST00000121343 942 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm6977-201ENSMUST00000121568 512 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm26486-201ENSMUST00000158021 110 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm21877-201ENSMUST00000185640 694 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm43850-201ENSMUST00000202021 578 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm44075-201ENSMUST00000204208 216 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm18103-201ENSMUST00000216621 779 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm7413-201ENSMUST00000219498 462 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm26442-201ENSMUST00000082588 153 ntBASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Upk3aQ9JKX8 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms