Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm10182-201ENSMUST00000178676 273 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm5327-201ENSMUST00000182864 1009 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Mir6999-201ENSMUST00000183498 61 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm27225-201ENSMUST00000183833 557 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm17977-201ENSMUST00000198743 574 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm43345-201ENSMUST00000199484 269 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm42760-201ENSMUST00000199814 311 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm17893-201ENSMUST00000203017 770 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC153845.1-201ENSMUST00000213596 428 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 CT030124.1-201ENSMUST00000217130 235 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm8264-201ENSMUST00000217801 465 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm18940-201ENSMUST00000222518 871 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC154687.1-201ENSMUST00000224875 677 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC107663.2-201ENSMUST00000225534 1234 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC154323.3-201ENSMUST00000226927 1660 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Trim39Q9ESN2 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm42534-201ENSMUST00000196063 1754 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm16409-201ENSMUST00000100510 747 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm13573-201ENSMUST00000116410 631 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm9836-201ENSMUST00000117132 216 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm13160-201ENSMUST00000118441 627 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm12687-201ENSMUST00000119752 706 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm11901-201ENSMUST00000120412 437 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm9143-201ENSMUST00000120745 745 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm8172-201ENSMUST00000120762 750 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Gm8550-201ENSMUST00000161621 653 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC7.11□□□□□ -1.27
Trim39Q9ESN2 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC7.11□□□□□ -1.27
Trim39Q9ESN2 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms