Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim42Q9D2H5 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm45088-201ENSMUST00000207066 1408 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm25761-201ENSMUST00000103983 128 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm24472-201ENSMUST00000104484 132 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm15971-201ENSMUST00000119372 211 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm2214-201ENSMUST00000121333 330 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm11797-201ENSMUST00000121336 754 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm11385-201ENSMUST00000121513 570 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm11760-201ENSMUST00000122355 796 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm24635-201ENSMUST00000122712 128 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm6472-201ENSMUST00000178147 651 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm9423-201ENSMUST00000183173 997 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm37550-201ENSMUST00000193230 463 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Igkv8-22-201ENSMUST00000199501 367 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm5609-201ENSMUST00000210008 1267 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm4800-201ENSMUST00000215776 1266 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm18252-203ENSMUST00000215855 757 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm18510-201ENSMUST00000219335 1096 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm9249-201ENSMUST00000221420 578 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm30155-201ENSMUST00000223458 339 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 AC154371.1-201ENSMUST00000226600 412 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 AC133654.1-201ENSMUST00000228411 672 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Gm44800-201ENSMUST00000207510 1855 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 AC154681.1-201ENSMUST00000225876 1735 ntBASIC7.44□□□□□ -1.22
Trim42Q9D2H5 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim42Q9D2H5 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms