Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh23Q99PF4 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm22499-201ENSMUST00000104501 135 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm14098-201ENSMUST00000119295 623 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Mir1947-201ENSMUST00000158235 85 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm26381-201ENSMUST00000174895 92 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm6543-201ENSMUST00000197353 808 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm44259-201ENSMUST00000204996 298 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm16057-201ENSMUST00000120811 759 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm3841-201ENSMUST00000191399 451 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm24125-201ENSMUST00000104105 137 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm12494-201ENSMUST00000121684 521 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdh23Q99PF4 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.22□□□□□ -1.41
Cdh23Q99PF4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdh23Q99PF4 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms