Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm26570-201ENSMUST00000180672 342 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm5244-202ENSMUST00000189517 743 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm42580-201ENSMUST00000197223 753 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm5324-201ENSMUST00000208115 476 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm22126-201ENSMUST00000083244 142 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.72□□□□□ -1.49
Scrt1Q99M85 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC5.72□□□□□ -1.49
Scrt1Q99M85 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scrt1Q99M85 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scrt1Q99M85 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
Scrt1Q99M85 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scrt1Q99M85 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Mir466j-201ENSMUST00000116876 122 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm12262-201ENSMUST00000119915 305 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm22523-201ENSMUST00000158696 100 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm3351-201ENSMUST00000193454 505 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm19185-201ENSMUST00000196365 643 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Mir298-201ENSMUST00000083476 82 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm26163-201ENSMUST00000083792 178 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.71□□□□□ -1.5
Scrt1Q99M85 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scrt1Q99M85 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms