Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm9652-201ENSMUST00000209345 163 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Lsm1Q8VC85 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm25916-201ENSMUST00000104263 131 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm24888-201ENSMUST00000104387 130 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm12040-201ENSMUST00000118357 537 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm4992-201ENSMUST00000120256 768 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm13740-201ENSMUST00000120590 310 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm22990-201ENSMUST00000175427 89 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm28114-201ENSMUST00000187232 379 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm5324-201ENSMUST00000208115 476 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm7808-201ENSMUST00000082002 387 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.16□□□□□ -1.42
Lsm1Q8VC85 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Lsm1Q8VC85 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm26422-201ENSMUST00000104276 132 ntBASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.15□□□□□ -1.42
Lsm1Q8VC85 Gm13338-201ENSMUST00000120235 361 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms