Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Retreg1-203ENSMUST00000226438 2783 ntBASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a6Q8C6K9 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm43873-201ENSMUST00000204505 3938 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm44021-201ENSMUST00000203055 3516 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm13265-201ENSMUST00000118090 421 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm20691-201ENSMUST00000176889 333 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm16531-201ENSMUST00000180658 967 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm44768-201ENSMUST00000205719 393 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm45473-201ENSMUST00000211452 616 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21241-201ENSMUST00000179551 934 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm27970-201ENSMUST00000184854 407 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm20819-201ENSMUST00000191091 925 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm20871-201ENSMUST00000191322 931 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Gm18943-201ENSMUST00000207357 1216 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a6Q8C6K9 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Thap6-201ENSMUST00000191860 3151 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm15715-201ENSMUST00000118032 283 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm9597-201ENSMUST00000171913 602 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm23799-201ENSMUST00000175559 120 ntBASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a6Q8C6K9 Gm42814-201ENSMUST00000199370 460 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms