Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm26784-201ENSMUST00000181666 410 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm26959-201ENSMUST00000182376 978 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm9274-201ENSMUST00000182505 984 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm18350-201ENSMUST00000187395 955 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm44472-201ENSMUST00000204922 943 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm44979-201ENSMUST00000206218 287 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm18205-201ENSMUST00000209215 841 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm45319-201ENSMUST00000210220 318 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm32899-201ENSMUST00000219694 207 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm4796-201ENSMUST00000219802 624 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 AC123061.2-201ENSMUST00000226234 802 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm9762-201ENSMUST00000036976 444 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm43209-201ENSMUST00000198949 1588 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Mir503-201ENSMUST00000102168 71 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm22426-201ENSMUST00000103811 96 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm12814-201ENSMUST00000117091 846 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm14755-201ENSMUST00000118037 384 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm14125-202ENSMUST00000120921 756 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm6977-201ENSMUST00000121568 512 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm24734-201ENSMUST00000158860 262 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm8221-201ENSMUST00000178052 564 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Mir6403-201ENSMUST00000185007 129 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm27596-201ENSMUST00000185061 83 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28190-201ENSMUST00000189766 722 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm7369-201ENSMUST00000192738 936 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm18428-201ENSMUST00000194986 791 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm42461-201ENSMUST00000198627 1150 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm43505-201ENSMUST00000200579 139 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm18995-201ENSMUST00000202981 520 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm21054-201ENSMUST00000203981 380 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm44931-201ENSMUST00000206056 545 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 AC115750.1-201ENSMUST00000220441 567 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr683-201ENSMUST00000061284 960 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm20302-201ENSMUST00000080671 275 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm6166-201ENSMUST00000098689 409 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm3203-201ENSMUST00000197670 2389 ntBASIC8.3□□□□□ -1.08
Trim47Q8C0E3 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim47Q8C0E3 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms