Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC123867.1-201ENSMUST00000224990 816 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 AC124709.2-201ENSMUST00000227710 363 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 AC140244.1-201ENSMUST00000228454 229 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Ang2-201ENSMUST00000051274 438 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 9330161L09Rik-201ENSMUST00000056140 999 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm6378-201ENSMUST00000084199 444 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Slc7a8-201ENSMUST00000022787 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Il17rd-205ENSMUST00000226105 2923 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Echdc3-201ENSMUST00000042658 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Zfp385b-201ENSMUST00000090766 2740 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Polr1b-202ENSMUST00000103205 3998 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Mgl2-201ENSMUST00000041550 1586 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Mapre2-201ENSMUST00000025127 4026 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Tert-201ENSMUST00000022104 4313 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Crx-204ENSMUST00000174318 2880 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Cyp19a1-201ENSMUST00000034811 2373 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Aldoc-201ENSMUST00000017534 2786 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Ripply1-201ENSMUST00000101217 811 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm12966-201ENSMUST00000118024 810 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm3943-201ENSMUST00000118606 718 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm12551-201ENSMUST00000122073 726 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm22481-201ENSMUST00000122562 192 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm4835-201ENSMUST00000155839 972 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm24359-201ENSMUST00000158418 221 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm23704-201ENSMUST00000158844 340 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 H2-M5-203ENSMUST00000169189 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trim35Q8C006 Mir378b-201ENSMUST00000175244 92 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20717-201ENSMUST00000176762 657 ntTSL 5 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29272-201ENSMUST00000185476 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29512-201ENSMUST00000185544 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21919-201ENSMUST00000185653 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm4850-201ENSMUST00000185684 559 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28110-201ENSMUST00000185782 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29120-201ENSMUST00000186111 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28838-201ENSMUST00000186338 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29057-201ENSMUST00000186468 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28446-201ENSMUST00000186508 694 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29661-201ENSMUST00000186781 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28737-201ENSMUST00000186808 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21824-201ENSMUST00000186810 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29118-201ENSMUST00000186908 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28433-201ENSMUST00000187085 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21796-201ENSMUST00000187116 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21840-201ENSMUST00000187212 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29635-201ENSMUST00000187221 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29420-201ENSMUST00000187261 694 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21795-201ENSMUST00000187263 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28814-201ENSMUST00000187334 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21720-201ENSMUST00000187428 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28759-201ENSMUST00000187621 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21848-201ENSMUST00000187722 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28831-201ENSMUST00000187739 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28200-201ENSMUST00000187778 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29026-201ENSMUST00000187787 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28773-201ENSMUST00000187925 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21766-201ENSMUST00000187962 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21837-201ENSMUST00000188117 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28752-201ENSMUST00000188340 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28797-201ENSMUST00000188543 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28855-201ENSMUST00000188680 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29378-201ENSMUST00000188723 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28569-201ENSMUST00000188748 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21829-201ENSMUST00000188787 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28120-201ENSMUST00000188812 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28369-201ENSMUST00000188993 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29037-201ENSMUST00000189092 313 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm29144-201ENSMUST00000189235 339 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21777-201ENSMUST00000189307 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28247-201ENSMUST00000189329 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28909-201ENSMUST00000189406 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28350-201ENSMUST00000189453 696 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28705-201ENSMUST00000189548 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm28861-201ENSMUST00000189681 315 ntBASIC9.28□□□□□ -0.92
Trim35Q8C006 Gm21906-201ENSMUST00000189760 696 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms