Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm24989-201ENSMUST00000104461 88 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm14712-201ENSMUST00000120195 772 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm12591-201ENSMUST00000122407 1177 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm25487-201ENSMUST00000158725 125 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm29516-201ENSMUST00000190402 468 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm37430-201ENSMUST00000193039 196 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm34768-201ENSMUST00000193884 565 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm44571-201ENSMUST00000208092 533 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 AC116589.9-201ENSMUST00000221462 908 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Gm8822-201ENSMUST00000118948 2347 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.92□□□□□ -0.98
Usp40Q8BWR4 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.92□□□□□ -0.98
Usp40Q8BWR4 AC122305.1-201ENSMUST00000214803 3921 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm18300-201ENSMUST00000192792 1406 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm24434-201ENSMUST00000104081 132 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm8692-201ENSMUST00000118102 438 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm25057-201ENSMUST00000157366 88 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm24343-201ENSMUST00000158708 111 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm22094-201ENSMUST00000158976 117 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm17366-201ENSMUST00000167629 187 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm3351-201ENSMUST00000193454 505 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm8869-201ENSMUST00000195222 947 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm18839-201ENSMUST00000204292 670 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm44213-201ENSMUST00000204977 703 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm46436-201ENSMUST00000221851 1294 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Gm8256-203ENSMUST00000228692 591 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Usp40Q8BWR4 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 124.5 ms