Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Ddx55Q6ZPL9 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm26079-201ENSMUST00000104066 133 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm24173-201ENSMUST00000104130 128 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm25917-201ENSMUST00000104267 130 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm23440-201ENSMUST00000104299 130 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm13400-201ENSMUST00000117436 380 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm23539-201ENSMUST00000157537 224 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm23030-201ENSMUST00000158004 273 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm3307-201ENSMUST00000176164 632 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm43945-201ENSMUST00000203595 754 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm17918-201ENSMUST00000205315 574 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm45514-201ENSMUST00000211531 689 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ddx55Q6ZPL9 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ddx55Q6ZPL9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ddx55Q6ZPL9 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ddx55Q6ZPL9 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Ddx55Q6ZPL9 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Ddx55Q6ZPL9 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm14529-201ENSMUST00000117894 406 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm13930-201ENSMUST00000118569 368 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 n-R5s30-201ENSMUST00000122624 122 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm24065-201ENSMUST00000157487 264 ntBASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx55Q6ZPL9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms