Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shank3Q4ACU6 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm14158-201ENSMUST00000118409 308 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm14267-201ENSMUST00000119751 496 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm15237-201ENSMUST00000122104 469 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm38181-201ENSMUST00000181357 720 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm29778-201ENSMUST00000201667 466 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm24041-201ENSMUST00000083115 156 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.87□□□□□ -1.15
Shank3Q4ACU6 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm14755-201ENSMUST00000118037 384 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm37024-201ENSMUST00000192224 868 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Mir188-201ENSMUST00000083464 68 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Mir143-201ENSMUST00000083511 63 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm10764-202ENSMUST00000220397 2335 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm25439-201ENSMUST00000158280 131 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm22420-201ENSMUST00000178795 126 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm28017-201ENSMUST00000183434 126 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Mir6417-201ENSMUST00000183815 116 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm18689-201ENSMUST00000203969 902 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.86□□□□□ -1.15
Shank3Q4ACU6 AC164567.4-201ENSMUST00000219708 483 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms