Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Upf3bQ3ULL6 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Upf3bQ3ULL6 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm22231-201ENSMUST00000101027 73 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm12874-201ENSMUST00000117190 913 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm13176-201ENSMUST00000117910 477 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm8312-201ENSMUST00000119380 618 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm2986-201ENSMUST00000121603 382 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm27853-201ENSMUST00000184176 250 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm15732-201ENSMUST00000079794 480 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Upf3bQ3ULL6 Pramel-201ENSMUST00000118979 1383 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm15016-201ENSMUST00000117300 720 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm12565-201ENSMUST00000119004 649 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm5387-201ENSMUST00000119776 857 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm7212-201ENSMUST00000120817 348 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm8550-201ENSMUST00000161621 653 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 Gm5050-201ENSMUST00000197164 775 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.82□□□□□ -1.32
Upf3bQ3ULL6 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms