Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm8534-201ENSMUST00000118553 766 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm13222-201ENSMUST00000119638 138 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm12229-201ENSMUST00000120487 468 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm12181-201ENSMUST00000121448 531 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm26353-201ENSMUST00000158224 255 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm6061-201ENSMUST00000175860 492 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Mir7082-201ENSMUST00000183526 92 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Mir6244-201ENSMUST00000184156 117 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Mir8097-201ENSMUST00000185150 119 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm28665-201ENSMUST00000189269 670 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm7463-201ENSMUST00000201541 547 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm17918-201ENSMUST00000205315 574 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm7368-201ENSMUST00000213307 367 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm18899-201ENSMUST00000217663 546 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm3213-201ENSMUST00000219296 441 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.03□□□□□ -1.28
Shmt1P50431 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Shmt1P50431 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Shmt1P50431 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Shmt1P50431 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Shmt1P50431 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Shmt1P50431 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Shmt1P50431 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm26340-201ENSMUST00000102365 99 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Rnu11-201ENSMUST00000104135 134 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm26144-201ENSMUST00000104475 132 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Shmt1P50431 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm13702-201ENSMUST00000118542 825 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm15621-201ENSMUST00000119162 364 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm15403-201ENSMUST00000119343 1227 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm13341-201ENSMUST00000120780 672 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm25550-201ENSMUST00000158079 128 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm9064-201ENSMUST00000163579 566 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm20574-201ENSMUST00000182867 917 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm29640-201ENSMUST00000187972 278 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC7.02□□□□□ -1.29
Shmt1P50431 Gm37213-201ENSMUST00000193077 586 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.02□□□□□ -1.29
Shmt1P50431 Gm38154-201ENSMUST00000195444 340 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms