Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.02□□□□□ -1.44
Sox6P40645 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Sox6P40645 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Gm13141-201ENSMUST00000117417 456 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Gm4914-201ENSMUST00000119757 459 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm6081-201ENSMUST00000134472 489 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox6P40645 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm20615-201ENSMUST00000177503 705 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Sox6P40645 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Sox6P40645 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Gm43689-201ENSMUST00000195951 427 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox6P40645 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox6P40645 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.02□□□□□ -1.45
Sox6P40645 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.02□□□□□ -1.45
Sox6P40645 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.02□□□□□ -1.45
Sox6P40645 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox6P40645 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox6P40645 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sox6P40645 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox6P40645 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.02□□□□□ -1.45
Sox6P40645 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.01□□□□□ -1.45
Sox6P40645 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Sox6P40645 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sox6P40645 Gm22710-201ENSMUST00000116892 125 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm5601-201ENSMUST00000118909 972 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm25281-201ENSMUST00000157270 104 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm25395-201ENSMUST00000157343 272 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm3585-201ENSMUST00000173438 875 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Sox6P40645 Gm23810-201ENSMUST00000175150 74 ntBASIC6.01□□□□□ -1.45
Sox6P40645 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm29650-201ENSMUST00000188485 742 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm37526-201ENSMUST00000194640 619 ntBASIC6.01□□□□□ -1.45
Sox6P40645 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Gm44225-201ENSMUST00000203582 186 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm19764-201ENSMUST00000203630 649 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm18012-201ENSMUST00000204558 773 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox6P40645 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Sox6P40645 Gm18040-201ENSMUST00000217922 827 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.01□□□□□ -1.45
Sox6P40645 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.01□□□□□ -1.45
Sox6P40645 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.01□□□□□ -1.45
Sox6P40645 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sox6P40645 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.01□□□□□ -1.45
Sox6P40645 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Sox6P40645 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Sox6P40645 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.01□□□□□ -1.45
Sox6P40645 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Sox6P40645 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox6P40645 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sox6P40645 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox6P40645 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sox6P40645 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms