Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Col18a1P39061 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm8501-201ENSMUST00000117684 432 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Gm15331-201ENSMUST00000120225 385 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC8.54□□□□□ -1.04
Col18a1P39061 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.54□□□□□ -1.04
Col18a1P39061 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 AL603745.1-201ENSMUST00000215473 532 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 AC124826.1-201ENSMUST00000221651 325 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 AC154730.1-201ENSMUST00000227874 816 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col18a1P39061 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.54□□□□□ -1.04
Col18a1P39061 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm22985-201ENSMUST00000122754 116 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm26172-201ENSMUST00000158421 134 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm3053-201ENSMUST00000161709 616 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
Col18a1P39061 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm37689-201ENSMUST00000193139 275 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 AC161426.1-201ENSMUST00000214137 286 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm18413-201ENSMUST00000221573 655 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm16415-201ENSMUST00000080097 489 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm25415-201ENSMUST00000104220 132 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm5139-201ENSMUST00000175943 249 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm27887-201ENSMUST00000184367 102 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Gm27985-201ENSMUST00000185112 378 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 AC159297.2-201ENSMUST00000219567 1075 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 AC133517.2-201ENSMUST00000226820 690 ntBASIC8.53□□□□□ -1.04
Col18a1P39061 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col18a1P39061 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col18a1P39061 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Col18a1P39061 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC8.52□□□□□ -1.04
Col18a1P39061 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
Col18a1P39061 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Col18a1P39061 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Col18a1P39061 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Col18a1P39061 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm12507-201ENSMUST00000119155 415 ntBASIC8.52□□□□□ -1.05
Col18a1P39061 Gm15158-201ENSMUST00000120577 570 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms