Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 CT009480.1-201ENSMUST00000225771 4480 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 AC136986.2-201ENSMUST00000220880 2944 ntBASIC6.35□□□□□ -1.39
Hoxd3P09027 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC6.35□□□□□ -1.39
Hoxd3P09027 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxd3P09027 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm44883-201ENSMUST00000206063 3258 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm16409-201ENSMUST00000100510 747 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm23131-201ENSMUST00000104253 132 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm10243-201ENSMUST00000117571 333 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm6664-201ENSMUST00000119138 468 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm5793-201ENSMUST00000119393 630 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm11252-201ENSMUST00000120572 939 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm12880-201ENSMUST00000120652 494 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm9143-201ENSMUST00000120745 745 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm8172-201ENSMUST00000120762 750 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm15009-201ENSMUST00000121387 322 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm11838-201ENSMUST00000121999 231 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm25970-201ENSMUST00000157165 86 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm23068-201ENSMUST00000158239 293 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm26407-201ENSMUST00000158504 307 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm18604-201ENSMUST00000172535 558 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm26929-201ENSMUST00000182703 753 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Mir6940-201ENSMUST00000183447 70 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Mir8110-201ENSMUST00000183771 97 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm20561-201ENSMUST00000188131 292 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC6.34□□□□□ -1.39
Hoxd3P09027 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm43652-201ENSMUST00000196219 675 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.34□□□□□ -1.39
Hoxd3P09027 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm45034-201ENSMUST00000206831 482 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm9689-201ENSMUST00000210009 428 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm6929-201ENSMUST00000210930 468 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm7546-202ENSMUST00000211354 275 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm18903-201ENSMUST00000215343 480 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 AC174082.1-201ENSMUST00000221106 307 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxd3P09027 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hoxd3P09027 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxd3P09027 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6.34□□□□□ -1.39
Hoxd3P09027 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms