Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm21756-201ENSMUST00000178380 930 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm21405-201ENSMUST00000179024 930 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm28637-201ENSMUST00000179424 345 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm27861-201ENSMUST00000183920 214 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm27219-201ENSMUST00000184633 742 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Mir8095-201ENSMUST00000185103 129 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm27458-201ENSMUST00000185108 121 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm21191-201ENSMUST00000186484 930 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm21489-201ENSMUST00000189668 818 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm28239-201ENSMUST00000190225 447 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm29503-201ENSMUST00000191044 930 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm26413-202ENSMUST00000198972 127 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm7542-201ENSMUST00000201140 777 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm44138-201ENSMUST00000204939 271 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm19134-201ENSMUST00000221203 487 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm9315-201ENSMUST00000222696 908 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh1F7BJK1 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm12598-201ENSMUST00000117333 830 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm13878-201ENSMUST00000117986 577 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm11810-201ENSMUST00000118311 333 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm11987-201ENSMUST00000118524 381 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm13359-201ENSMUST00000119000 695 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm15007-201ENSMUST00000119982 710 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm15644-201ENSMUST00000121764 387 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm8192-201ENSMUST00000182196 958 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm4412-201ENSMUST00000186660 433 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm29355-201ENSMUST00000188178 697 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm3496-201ENSMUST00000188283 745 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms