Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdpk1Q9Z2A0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Gm10602-201ENSMUST00000098239 609 ntBASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdpk1Q9Z2A0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Gm6211-202ENSMUST00000167849 925 ntBASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdpk1Q9Z2A0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdpk1Q9Z2A0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdpk1Q9Z2A0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pdpk1Q9Z2A0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.33■□□□□ 0.53
Pdpk1Q9Z2A0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pdpk1Q9Z2A0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdpk1Q9Z2A0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdpk1Q9Z2A0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdpk1Q9Z2A0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdpk1Q9Z2A0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms