Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn9Q9Z0S7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn9Q9Z0S7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn9Q9Z0S7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn9Q9Z0S7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.4■□□□□ 0.38
Cldn9Q9Z0S7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cldn9Q9Z0S7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn9Q9Z0S7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms