Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cx3cr1Q9Z0D9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cx3cr1Q9Z0D9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Cx3cr1Q9Z0D9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cx3cr1Q9Z0D9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cx3cr1Q9Z0D9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cx3cr1Q9Z0D9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cx3cr1Q9Z0D9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cx3cr1Q9Z0D9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cx3cr1Q9Z0D9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cx3cr1Q9Z0D9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cx3cr1Q9Z0D9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms