Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.79■□□□□ 0.12
Nubp1Q9R060 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Timm23-208ENSMUST00000226683 750 ntBASIC15.79■□□□□ 0.12
Nubp1Q9R060 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.79■□□□□ 0.12
Nubp1Q9R060 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.78■□□□□ 0.12
Nubp1Q9R060 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nubp1Q9R060 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Nubp1Q9R060 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nubp1Q9R060 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Nubp1Q9R060 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nubp1Q9R060 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nubp1Q9R060 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nubp1Q9R060 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.77■□□□□ 0.11
Nubp1Q9R060 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Gm10138-203ENSMUST00000206952 366 ntBASIC15.76■□□□□ 0.11
Nubp1Q9R060 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Nubp1Q9R060 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gm11539-201ENSMUST00000119837 557 ntBASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gm13436-201ENSMUST00000120418 567 ntBASIC15.75■□□□□ 0.11
Nubp1Q9R060 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gm43183-201ENSMUST00000200632 547 ntBASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nubp1Q9R060 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nubp1Q9R060 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms