Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d3cQ9QZS8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Spcs1-204ENSMUST00000226782 949 ntBASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d3cQ9QZS8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d3cQ9QZS8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d3cQ9QZS8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d3cQ9QZS8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d3cQ9QZS8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d3cQ9QZS8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d3cQ9QZS8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh2d3cQ9QZS8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms