Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.66■□□□□ 0.74
Ercc4Q9QZD4 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc4Q9QZD4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc4Q9QZD4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Tgds-204ENSMUST00000228543 1594 ntBASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc4Q9QZD4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ercc4Q9QZD4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc4Q9QZD4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
Ercc4Q9QZD4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms