Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sec61a2Q9JLR1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Gm6420-201ENSMUST00000193885 723 ntBASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sec61a2Q9JLR1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sec61a2Q9JLR1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sec61a2Q9JLR1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sec61a2Q9JLR1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sec61a2Q9JLR1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms