Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfx5Q9JL61 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.19■□□□□ 0.66
Rfx5Q9JL61 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.18■□□□□ 0.66
Rfx5Q9JL61 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfx5Q9JL61 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfx5Q9JL61 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Gm5643-201ENSMUST00000117081 966 ntBASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx5Q9JL61 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx5Q9JL61 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx5Q9JL61 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx5Q9JL61 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx5Q9JL61 Gm13158-201ENSMUST00000122007 736 ntBASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx5Q9JL61 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx5Q9JL61 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Gm13168-201ENSMUST00000121771 632 ntBASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx5Q9JL61 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx5Q9JL61 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms