Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.85■□□□□ 0.77
Copb1Q9JIF7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Copb1Q9JIF7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb1Q9JIF7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb1Q9JIF7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb1Q9JIF7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Copb1Q9JIF7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb1Q9JIF7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb1Q9JIF7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb1Q9JIF7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Copb1Q9JIF7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Copb1Q9JIF7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.79■□□□□ 0.76
Copb1Q9JIF7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.78■□□□□ 0.76
Copb1Q9JIF7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Copb1Q9JIF7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Copb1Q9JIF7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms