Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rhox4bQ9JI43 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Rhox4bQ9JI43 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Rhox4bQ9JI43 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Rhox4bQ9JI43 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rhox4bQ9JI43 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Haglr-201ENSMUST00000100000 2085 ntBASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rhox4bQ9JI43 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Serp2-204ENSMUST00000228055 705 ntBASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rhox4bQ9JI43 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rhox4bQ9JI43 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms