Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.29■□□□□ 0.68
Rtn3Q9ES97 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtn3Q9ES97 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Gm12441-201ENSMUST00000121806 588 ntBASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn3Q9ES97 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.27■□□□□ 0.68
Rtn3Q9ES97 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn3Q9ES97 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rtn3Q9ES97 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn3Q9ES97 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rtn3Q9ES97 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn3Q9ES97 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Gm6211-202ENSMUST00000167849 925 ntBASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtn3Q9ES97 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rtn3Q9ES97 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn3Q9ES97 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn3Q9ES97 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn3Q9ES97 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms