Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm4974-201ENSMUST00000209974 875 ntBASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upf1Q9EPU0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Gm12895-201ENSMUST00000122214 226 ntBASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Upf1Q9EPU0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upf1Q9EPU0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Gm26039-201ENSMUST00000158152 144 ntBASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Upf1Q9EPU0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.71■□□□□ 0.91
Upf1Q9EPU0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.71■□□□□ 0.91
Upf1Q9EPU0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Upf1Q9EPU0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Upf1Q9EPU0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Upf1Q9EPU0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Upf1Q9EPU0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Auts2-212ENSMUST00000178555 309 ntBASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.69■□□□□ 0.9
Upf1Q9EPU0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Upf1Q9EPU0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upf1Q9EPU0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Upf1Q9EPU0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms