Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Mbd3l1Q9D9H3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Mbd3l1Q9D9H3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.71■□□□□ 0.1
Mbd3l1Q9D9H3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Mbd3l1Q9D9H3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Mbd3l1Q9D9H3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Mbd3l1Q9D9H3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.68■□□□□ 0.1
Mbd3l1Q9D9H3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mbd3l1Q9D9H3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mbd3l1Q9D9H3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mbd3l1Q9D9H3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms