Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Mir2861-201ENSMUST00000175539 82 ntBASIC19.99■□□□□ 0.79
Rpap3Q9D706 Mir7071-201ENSMUST00000184847 69 ntBASIC19.99■□□□□ 0.79
Rpap3Q9D706 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Gm37055-201ENSMUST00000191866 133 ntBASIC19.99■□□□□ 0.79
Rpap3Q9D706 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap3Q9D706 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Rpap3Q9D706 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap3Q9D706 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap3Q9D706 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.98■□□□□ 0.79
Rpap3Q9D706 Mir5122-201ENSMUST00000175004 89 ntBASIC19.98■□□□□ 0.79
Rpap3Q9D706 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rpap3Q9D706 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap3Q9D706 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.97■□□□□ 0.79
Rpap3Q9D706 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap3Q9D706 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.96■□□□□ 0.79
Rpap3Q9D706 Gm12382-201ENSMUST00000122005 922 ntBASIC19.96■□□□□ 0.79
Rpap3Q9D706 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Rpap3Q9D706 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.96■□□□□ 0.79
Rpap3Q9D706 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap3Q9D706 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap3Q9D706 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpap3Q9D706 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.93■□□□□ 0.78
Rpap3Q9D706 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap3Q9D706 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap3Q9D706 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms