Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop56Q9D6Z1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop56Q9D6Z1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Gm9847-201ENSMUST00000052528 599 ntBASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop56Q9D6Z1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nop56Q9D6Z1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nop56Q9D6Z1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Smad6-203ENSMUST00000179458 273 ntBASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nop56Q9D6Z1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nop56Q9D6Z1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nop56Q9D6Z1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nop56Q9D6Z1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms